Proceedings of the International Joint Workshop on Natural Language Processing in Biomedicine and its Applications (NLPBA/BioNLP)

Nigel Collier, Patrick Ruch, Adeline Nazarenko (Editors)


Anthology ID:
W04-12
Month:
August 28th and 29th
Year:
2004
Address:
Geneva, Switzerland
Venue:
BioNLP
SIG:
Publisher:
COLING
URL:
https://aclanthology.org/W04-12
DOI:
Bib Export formats:
BibTeX MODS XML EndNote

pdf bib
Proceedings of the International Joint Workshop on Natural Language Processing in Biomedicine and its Applications (NLPBA/BioNLP)
Nigel Collier | Patrick Ruch | Adeline Nazarenko

pdf bib
Recognizing Names in Biomedical Texts using Hidden Markov Model and SVM plus Sigmoid
GuoDong Zhou

pdf bib
Using Argumentation to Retrieve Articles with Similar Citations from MEDLINE
Imad Tbahriti | Christine Chichester | Frédérique Lisacek | Patrick Ruch

pdf bib
Analysis of Link Grammar on Biomedical Dependency Corpus Targeted at Protein-Protein Interactions
Sampo Pyysalo | Filip Ginter | Tapio Pahikkala | Jorma Boberg | Jouni Järvinen | Tapio Salakoski | Jeppe Koivula

pdf bib
Discovering Patterns to Extract Protein-Protein Interactions from Full Biomedical Texts
Minlie Huang | Xiaoyan Zhu | Donald G. Payan | Kunbin Qu | Ming Li

pdf bib
Zone Identification in Biology Articles as a Basis for Information Extraction
Yoko Mizuta | Nigel Collier

pdf bib
Assessing the Correlation between Contextual Patterns and Biological Entity Tagging
M. Krallinger | M. Padrón | C. Blaschke | A. Valencia

pdf bib
Event-Based Information Extraction for the Biomedical Domain: the Caderige Project
Erick Alphonse | Sophie Aubin | Philippe Bessières | Gilles Bisson | Thierry Hamon | Sandrine Lagarrigue | Adeline Nazarenko | Alain-Pierre Manine | Claire Nédellec | Mohamed Ould Abdel Vetah | Thierry Poibeau | Davy Weissenbacher

pdf bib
Distributed Modules for Text Annotation and IE Applied to the Biomedical Domain
Harald Kirsch | Dietrich Rebholz-Schuhmann

pdf bib
Support Vector Machine Approach to Extracting Gene References into Function from Biological Documents
Chih Lee | Wen-Juan Hou | Hsin-Hsi Chen

pdf bib
Improving the Identification of Non-Anaphoric it using Support Vector Machines
José Carlos Clemente Litrán | Kenji Satou | Kentaro Torisawa

pdf bib
Creating a Test Corpus of Clinical Notes Manually Tagged for Part-of-Speech Information
Serguei Pakhomov | Anni Coden | Christopher Chute

pdf bib
Classification from Full Text: A Comparison of Canonical Sections of Scientific Papers
Gail Sinclair | Bonnie Webber

pdf bib
Introduction to the Bio-entity Recognition Task at JNLPBA
Nigel Collier | Tomoko Ohta | Yoshimasa Tsuruoka | Yuka Tateisi | Jin-Dong Kim

pdf bib
Incorporating Lexical Knowledge into Biomedical NE Recognition
Kyung-Mi Park | Seon-Ho Kim | Ki-Joong Lee | Do-Gil Lee | Hae-Chang Rim

pdf bib
Annotating Multiple Types of Biomedical Entities: A Single Word Classification Approach
Chih Lee | Wen-Juan Hou | Hsin-Hsi Chen

pdf bib
Named Entity Recognition in Biomedical Texts using an HMM Model
Shaojun Zhao

pdf bib
Exploiting Context for Biomedical Entity Recognition: From Syntax to the Web
Jenny Finkel | Shipra Dingare | Huy Nguyen | Malvina Nissim | Christopher Manning | Gail Sinclair

pdf bib
Adapting an NER-System for German to the Biomedical Domain
Marc Rössler

pdf bib
Exploring Deep Knowledge Resources in Biomedical Name Recognition
GuoDong Zhou | Jian Su

pdf bib
POSBIOTM-NER in the Shared Task of BioNLP/NLPBA2004
Yu Song | Eunju Kim | Gary Geunbae Lee | Byoung-kee Yi

pdf bib
Biomedical Named Entity Recognition using Conditional Random Fields and Rich Feature Sets
Burr Settles